{
  "_id": "6a4796812f27a93436c0ebf1",
  "Package": "EpiViz",
  "Type": "Package",
  "Title": "EpiViz",
  "Version": "0.2.0",
  "Authors@R": "person(\"Matthew\", \"Lee\", email = \"matthew.lee@bristol.ac.uk\", role = c(\"aut\", \"cre\"))",
  "Description": "An implementation of Circos plots for epidemiologists in\nR. It takes the Circlize package and adapts it for use by\nepidemiologists. Circos plots provide an informative way of\nplotting greater than 50 plotting points. A legend can be\nplotted automatically and customised.",
  "License": "CC0",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "VignetteBuilder": "knitr",
  "BugReports": "https://github.com/mattlee821/EpiViz/issues",
  "URL": "https://github.com/mattlee821/EpiViz,\nhttps://mattlee821.github.io/EpiViz/",
  "RoxygenNote": "7.3.3",
  "Config/pak/sysreqs": "libpng-dev perl",
  "Repository": "https://mrcieu.r-universe.dev",
  "Date/Publication": "2026-02-03 12:13:22 UTC",
  "RemoteUrl": "https://github.com/mattlee821/EpiViz",
  "RemoteRef": "HEAD",
  "RemoteSha": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-03 06:46:24 UTC",
    "User": "root"
  },
  "Author": "Matthew Lee [aut, cre]",
  "Maintainer": "Matthew Lee <matthew.lee@bristol.ac.uk>",
  "_user": "mrcieu",
  "_type": "src",
  "_file": "EpiViz_0.2.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/83e78a7629989514d1323a4eb62d00c6f60f7699f68578cb6c241d6950429887",
  "_filesize": 9057384,
  "_sha256": "83e78a7629989514d1323a4eb62d00c6f60f7699f68578cb6c241d6950429887",
  "_expires": "2026-10-11T11:01:20.000Z",
  "_created": "2026-07-03T06:46:24.000Z",
  "_published": "2026-07-03T11:01:21.475Z",
  "_jobs": [
    {
      "job": 84985993241,
      "time": 145,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8059692567"
    },
    {
      "job": 84985993680,
      "time": 153,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8059694547"
    },
    {
      "job": 84985993838,
      "time": 106,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8059681942"
    },
    {
      "job": 84985993565,
      "time": 107,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8059682446"
    },
    {
      "job": 84985993085,
      "time": 207,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8059652952"
    },
    {
      "job": 84985993367,
      "time": 116,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8059684603"
    },
    {
      "job": 84985993168,
      "time": 88,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8059677571"
    },
    {
      "job": 84985993713,
      "time": 83,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8059675765"
    },
    {
      "job": 84985993452,
      "time": 74,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8059673412"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28643434122",
  "_status": "success",
  "_upstream": "https://github.com/mattlee821/EpiViz",
  "_commit": {
    "id": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
    "author": "matt <leem@iarc.who.int>",
    "committer": "matt <leem@iarc.who.int>",
    "message": "fix(ci): enable package installation in pkgdown build\n",
    "time": 1770120802
  },
  "_maintainer": {
    "name": "Matthew Lee",
    "email": "matthew.lee@bristol.ac.uk",
    "login": "createreact",
    "description": "",
    "uuid": 62662357
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5",
      "role": "Depends"
    },
    {
      "package": "graphics",
      "role": "Depends"
    },
    {
      "package": "grDevices",
      "role": "Depends"
    },
    {
      "package": "circlize",
      "version": ">= 0.4.6",
      "role": "Imports"
    },
    {
      "package": "ComplexHeatmap",
      "version": ">= 1.20.0",
      "role": "Imports"
    },
    {
      "package": "grid",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "mattlee821",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-06",
      "n": 10
    }
  ],
  "_tags": [
    {
      "name": "v0.2.0",
      "date": "2026-02-03"
    }
  ],
  "_stars": 9,
  "_contributors": [
    {
      "user": "mattlee821",
      "count": 66,
      "uuid": 30179533
    }
  ],
  "_userbio": {
    "uuid": 15654827,
    "type": "organization",
    "name": "MRC Integrative Epidemiology Unit",
    "followers": 250
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/EpiViz"
  },
  "_devurl": "https://github.com/mattlee821/epiviz",
  "_pkgdown": "https://mattlee821.github.io/EpiViz/",
  "_searchresults": 44,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/EpiViz.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "circos_plot"
  ],
  "_datasets": [
    {
      "name": "EpiViz_data1",
      "title": "Example data: Simulated epidemiology results for track 1",
      "object": "EpiViz_data1",
      "class": [
        "data.frame"
      ],
      "fields": [
        "label",
        "class",
        "subgroup",
        "beta",
        "se",
        "pvalue",
        "lower_confidence_interval",
        "upper_confidence_interval"
      ],
      "rows": 120,
      "table": true,
      "tojson": true
    },
    {
      "name": "EpiViz_data2",
      "title": "Example data: Simulated epidemiology results for track 2",
      "object": "EpiViz_data2",
      "class": [
        "data.frame"
      ],
      "fields": [
        "label",
        "class",
        "subgroup",
        "beta",
        "se",
        "pvalue",
        "lower_confidence_interval",
        "upper_confidence_interval"
      ],
      "rows": 120,
      "table": true,
      "tojson": true
    },
    {
      "name": "EpiViz_data3",
      "title": "Example data: Simulated epidemiology results for track 3",
      "object": "EpiViz_data3",
      "class": [
        "data.frame"
      ],
      "fields": [
        "label",
        "class",
        "subgroup",
        "beta",
        "se",
        "pvalue",
        "lower_confidence_interval",
        "upper_confidence_interval"
      ],
      "rows": 120,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "circos_plot",
      "title": "Create a Circos plot with up to 3 tracks using points, lines or bars",
      "topics": [
        "circos_plot"
      ]
    },
    {
      "page": "EpiViz_data1",
      "title": "Example data: Simulated epidemiology results for track 1",
      "topics": [
        "EpiViz_data1"
      ]
    },
    {
      "page": "EpiViz_data2",
      "title": "Example data: Simulated epidemiology results for track 2",
      "topics": [
        "EpiViz_data2"
      ]
    },
    {
      "page": "EpiViz_data3",
      "title": "Example data: Simulated epidemiology results for track 3",
      "topics": [
        "EpiViz_data3"
      ]
    }
  ],
  "_readme": "https://github.com/mattlee821/EpiViz/raw/HEAD/README.md",
  "_rundeps": [
    "BiocGenerics",
    "circlize",
    "clue",
    "cluster",
    "codetools",
    "colorspace",
    "ComplexHeatmap",
    "crayon",
    "digest",
    "doParallel",
    "foreach",
    "generics",
    "GetoptLong",
    "GlobalOptions",
    "IRanges",
    "iterators",
    "matrixStats",
    "png",
    "RColorBrewer",
    "rjson",
    "S4Vectors",
    "shape"
  ],
  "_vignettes": [
    {
      "source": "install.Rmd",
      "filename": "install.html",
      "title": "Installation ",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Installation",
        "Handling ComplexHeatmap installation errors"
      ],
      "created": "2026-02-03 11:37:28",
      "modified": "2026-02-03 11:37:28",
      "commits": 1
    },
    {
      "source": "plot.Rmd",
      "filename": "plot.html",
      "title": "Creating plots ",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Plot",
        "Shared Axis Limits"
      ],
      "created": "2026-02-03 11:37:28",
      "modified": "2026-02-03 11:37:28",
      "commits": 1
    },
    {
      "source": "extra.Rmd",
      "filename": "extra.html",
      "title": "Extras ",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Lines and Bars",
        "Legends",
        "1. Track Legend (legend_track)",
        "2. Section Legend (legend_section)"
      ],
      "created": "2026-02-03 11:37:28",
      "modified": "2026-02-03 11:37:28",
      "commits": 1
    },
    {
      "source": "about.Rmd",
      "filename": "about.html",
      "title": "About",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Circos Plots",
        "Why Circular?",
        "EpiViz",
        "How it works"
      ],
      "created": "2026-02-03 11:37:28",
      "modified": "2026-02-03 11:37:28",
      "commits": 1
    }
  ],
  "_score": 4.898725181589493,
  "_indexed": false,
  "_nocasepkg": "epiviz",
  "_universes": [
    "mrcieu"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.2.0",
      "date": "2026-07-03T06:49:00.000Z",
      "distro": "resolute",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "https://r2.ropensci.org/2001fa3c09f7166006b5084e4f3b7ad17b4ee1a728d2b883d79ceb29f968373f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28643434122"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.2.0",
      "date": "2026-07-03T06:49:09.000Z",
      "distro": "resolute",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "https://r2.ropensci.org/d5562237abf106bfb9c068d7358e843fa50e0a7caf0cfe4c486aa4c289c27b82",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28643434122"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.2.0",
      "date": "2026-07-03T06:48:26.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "https://r2.ropensci.org/d3621047b634488667611860a7fbdada66ed387217778b27e47c441adab28766",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28643434122"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.2.0",
      "date": "2026-07-03T06:48:26.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "https://r2.ropensci.org/d4a5f345216395e9bd26d2cad5d80864f70f07eb6f7282d21d7d585035ac1282",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28643434122"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.2.0",
      "date": "2026-07-03T06:48:47.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "https://r2.ropensci.org/d473c656010311e5476a600cc4568d780ea2c21bf1c8287533964e08c486953f",
      "status": "success",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28643434122"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.2.0",
      "date": "2026-07-03T06:48:01.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "https://r2.ropensci.org/11a28a4560b0da5e05b902ddc60ed86ae34b78976690ec64a57026c49898e1e1",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28643434122"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.2.0",
      "date": "2026-07-03T06:47:52.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "https://r2.ropensci.org/59ef24b64631029b149e9e1c7eb800317e382a7fc5d9c71b3470e5405c089509",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28643434122"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.2.0",
      "date": "2026-07-03T06:47:48.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "https://r2.ropensci.org/3299d9583585c413e7bac59ac863132e4bd75273ae9a07cc98b02beea43920b8",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28643434122"
    }
  ]
}