{
  "_id": "6a1fec25b401979e734409cb",
  "Package": "EpiViz",
  "Type": "Package",
  "Title": "EpiViz",
  "Version": "0.2.0",
  "Authors@R": "person(\"Matthew\", \"Lee\", email = \"matthew.lee@bristol.ac.uk\", role = c(\"aut\", \"cre\"))",
  "Description": "An implementation of Circos plots for epidemiologists in\nR. It takes the Circlize package and adapts it for use by\nepidemiologists. Circos plots provide an informative way of\nplotting greater than 50 plotting points. A legend can be\nplotted automatically and customised.",
  "License": "CC0",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "VignetteBuilder": "knitr",
  "BugReports": "https://github.com/mattlee821/EpiViz/issues",
  "URL": "https://github.com/mattlee821/EpiViz,\nhttps://mattlee821.github.io/EpiViz/",
  "RoxygenNote": "7.3.3",
  "Config/pak/sysreqs": "libpng-dev perl",
  "Repository": "https://mrcieu.r-universe.dev",
  "Date/Publication": "2026-02-03 12:13:22 UTC",
  "RemoteUrl": "https://github.com/mattlee821/EpiViz",
  "RemoteRef": "HEAD",
  "RemoteSha": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-03 08:52:31 UTC",
    "User": "root"
  },
  "Author": "Matthew Lee [aut, cre]",
  "Maintainer": "Matthew Lee <matthew.lee@bristol.ac.uk>",
  "MD5sum": "b0eb89818bcde29d15e5a84495770b04",
  "_user": "mrcieu",
  "_type": "src",
  "_file": "EpiViz_0.2.0.tar.gz",
  "_fileid": "49681c5ca0c3360cda93f196ffa713f7461c90ba95d7d1fa7f3d18bb9320db5f",
  "_filesize": 9056951,
  "_sha256": "49681c5ca0c3360cda93f196ffa713f7461c90ba95d7d1fa7f3d18bb9320db5f",
  "_created": "2026-06-03T08:52:31.000Z",
  "_published": "2026-06-03T08:56:05.935Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79257164828,
      "time": 128,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7380024470"
    },
    {
      "job": 79257164902,
      "time": 138,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7380027679"
    },
    {
      "job": 79257164806,
      "time": 107,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7380018361"
    },
    {
      "job": 79257164814,
      "time": 98,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7380014070"
    },
    {
      "job": 79256548750,
      "time": 213,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7379978022"
    },
    {
      "job": 79257164787,
      "time": 132,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7380025829"
    },
    {
      "job": 79257164819,
      "time": 84,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7380009275"
    },
    {
      "job": 79257164853,
      "time": 76,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7380006287"
    },
    {
      "job": 79257164823,
      "time": 90,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7380011569"
    }
  ],
  "_buildurl": "https://github.com/r-universe/mrcieu/actions/runs/26874051042",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/mattlee821/EpiViz",
  "_commit": {
    "id": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
    "author": "matt <leem@iarc.who.int>",
    "committer": "matt <leem@iarc.who.int>",
    "message": "fix(ci): enable package installation in pkgdown build\n",
    "time": 1770120802
  },
  "_maintainer": {
    "name": "Matthew Lee",
    "email": "matthew.lee@bristol.ac.uk",
    "login": "createreact",
    "description": "",
    "uuid": 62662357
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5",
      "role": "Depends"
    },
    {
      "package": "graphics",
      "role": "Depends"
    },
    {
      "package": "grDevices",
      "role": "Depends"
    },
    {
      "package": "circlize",
      "version": ">= 0.4.6",
      "role": "Imports"
    },
    {
      "package": "ComplexHeatmap",
      "version": ">= 1.20.0",
      "role": "Imports"
    },
    {
      "package": "grid",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "mattlee821",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-06",
      "n": 10
    }
  ],
  "_tags": [
    {
      "name": "v0.2.0",
      "date": "2026-02-03"
    }
  ],
  "_stars": 9,
  "_contributors": [
    {
      "user": "mattlee821",
      "count": 66,
      "uuid": 30179533
    }
  ],
  "_userbio": {
    "uuid": 15654827,
    "type": "organization",
    "name": "MRC Integrative Epidemiology Unit"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/EpiViz"
  },
  "_devurl": "https://github.com/mattlee821/epiviz",
  "_pkgdown": "https://mattlee821.github.io/EpiViz/",
  "_searchresults": 43,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/EpiViz.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "circos_plot"
  ],
  "_datasets": [
    {
      "name": "EpiViz_data1",
      "title": "Example data: Simulated epidemiology results for track 1",
      "object": "EpiViz_data1",
      "class": [
        "data.frame"
      ],
      "fields": [
        "label",
        "class",
        "subgroup",
        "beta",
        "se",
        "pvalue",
        "lower_confidence_interval",
        "upper_confidence_interval"
      ],
      "rows": 120,
      "table": true,
      "tojson": true
    },
    {
      "name": "EpiViz_data2",
      "title": "Example data: Simulated epidemiology results for track 2",
      "object": "EpiViz_data2",
      "class": [
        "data.frame"
      ],
      "fields": [
        "label",
        "class",
        "subgroup",
        "beta",
        "se",
        "pvalue",
        "lower_confidence_interval",
        "upper_confidence_interval"
      ],
      "rows": 120,
      "table": true,
      "tojson": true
    },
    {
      "name": "EpiViz_data3",
      "title": "Example data: Simulated epidemiology results for track 3",
      "object": "EpiViz_data3",
      "class": [
        "data.frame"
      ],
      "fields": [
        "label",
        "class",
        "subgroup",
        "beta",
        "se",
        "pvalue",
        "lower_confidence_interval",
        "upper_confidence_interval"
      ],
      "rows": 120,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "circos_plot",
      "title": "Create a Circos plot with up to 3 tracks using points, lines or bars",
      "topics": [
        "circos_plot"
      ]
    },
    {
      "page": "EpiViz_data1",
      "title": "Example data: Simulated epidemiology results for track 1",
      "topics": [
        "EpiViz_data1"
      ]
    },
    {
      "page": "EpiViz_data2",
      "title": "Example data: Simulated epidemiology results for track 2",
      "topics": [
        "EpiViz_data2"
      ]
    },
    {
      "page": "EpiViz_data3",
      "title": "Example data: Simulated epidemiology results for track 3",
      "topics": [
        "EpiViz_data3"
      ]
    }
  ],
  "_readme": "https://github.com/mattlee821/EpiViz/raw/HEAD/README.md",
  "_rundeps": [
    "BiocGenerics",
    "circlize",
    "clue",
    "cluster",
    "codetools",
    "colorspace",
    "ComplexHeatmap",
    "crayon",
    "digest",
    "doParallel",
    "foreach",
    "generics",
    "GetoptLong",
    "GlobalOptions",
    "IRanges",
    "iterators",
    "matrixStats",
    "png",
    "RColorBrewer",
    "rjson",
    "S4Vectors",
    "shape"
  ],
  "_vignettes": [
    {
      "source": "install.Rmd",
      "filename": "install.html",
      "title": "Installation ",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Installation",
        "Handling ComplexHeatmap installation errors"
      ],
      "created": "2026-02-03 11:37:28",
      "modified": "2026-02-03 11:37:28",
      "commits": 1
    },
    {
      "source": "plot.Rmd",
      "filename": "plot.html",
      "title": "Creating plots ",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Plot",
        "Shared Axis Limits"
      ],
      "created": "2026-02-03 11:37:28",
      "modified": "2026-02-03 11:37:28",
      "commits": 1
    },
    {
      "source": "extra.Rmd",
      "filename": "extra.html",
      "title": "Extras ",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Lines and Bars",
        "Legends",
        "1. Track Legend (legend_track)",
        "2. Section Legend (legend_section)"
      ],
      "created": "2026-02-03 11:37:28",
      "modified": "2026-02-03 11:37:28",
      "commits": 1
    },
    {
      "source": "about.Rmd",
      "filename": "about.html",
      "title": "About",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Circos Plots",
        "Why Circular?",
        "EpiViz",
        "How it works"
      ],
      "created": "2026-02-03 11:37:28",
      "modified": "2026-02-03 11:37:28",
      "commits": 1
    }
  ],
  "_score": 4.888740960682893,
  "_indexed": false,
  "_nocasepkg": "epiviz",
  "_universes": [
    "mrcieu"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.2.0",
      "date": "2026-06-03T08:55:22.000Z",
      "distro": "noble",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "c767b0b3790366cdd691ec8214d68b972a042777dfb1e4b87526e4d635dd025a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/26874051042"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.2.0",
      "date": "2026-06-03T08:55:25.000Z",
      "distro": "noble",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "576c49084f70b659790451016644f8f57a88416c857cad1f2a05fd99a7cac9d6",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/26874051042"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.2.0",
      "date": "2026-06-03T08:55:04.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "647ac51b130ff83dd6399701457e5844325d4af327242f5d5aa79dc40c2efd00",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/26874051042"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.2.0",
      "date": "2026-06-03T08:54:49.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "a929934774055843166830d7db14a46bb1f9f529e811d25b8b58170479d25f6a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/26874051042"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.2.0",
      "date": "2026-06-03T08:55:35.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "0bc1d9757d7ea1d87c452004a524001122da09c308ec2490aed29657a27b28e2",
      "status": "success",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/26874051042"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.2.0",
      "date": "2026-06-03T08:54:25.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "0906e5fef3b474c1c3317794c4d39c2b5c3625fb227a849e80fe7bae8a12b4ef",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/26874051042"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.2.0",
      "date": "2026-06-03T08:54:21.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "5f2b0c3239cfcafd88962b4bfe65978873f2ec9cec333e9acb5e361b7090c27f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/26874051042"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.2.0",
      "date": "2026-06-03T08:54:33.000Z",
      "commit": "95cb65c0ffb1cde97b27c326b194ffa0f715660d",
      "fileid": "361cdc092ab68b17aa822ca74612b8940a7ac4a9bd6df82e063c22da13c8aeb9",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/26874051042"
    }
  ]
}