{
  "_id": "6a1f268bb401979e73422059",
  "Package": "MRBEE",
  "Type": "Package",
  "Title": "Mendelian Randomization using Bias-Corrected Estimating Equation\nand Iterative Pleiotropy Testing",
  "Version": "1.0.0",
  "Authors@R": "c(person(\"Noah\", \"Lorincz-Comi\", email = \"njl96@case.edu\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-0517-2499\")),\nperson(\"Yihe\", \"Yang\", email = \"yxy1234@case.edu\", role = c(\"aut\"),\ncomment = c(ORCID = \"0000-0001-6563-3579\")))",
  "Description": "This package performs multivariate Mendelian\nrandomization. It is characterized by the removal of\nmeasurement error bias caused by the estimation error of GWAS\neffect size estimates using an unbiased estimating function in\nmeasurement error analysis. It also utilizes a pleiotropy test\nto dynamically detect and remove potential pleiotropy, making\nthe causal effect robust to pleiotropy.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.3.3",
  "LazyDataCompression": "xz",
  "Repository": "https://mrcieu.r-universe.dev",
  "Date/Publication": "2026-05-16 02:35:38 UTC",
  "RemoteUrl": "https://github.com/noahlorinczcomi/MRBEE",
  "RemoteRef": "HEAD",
  "RemoteSha": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-16 05:53:43 UTC",
    "User": "root"
  },
  "Author": "Noah Lorincz-Comi [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-0517-2499>),\nYihe Yang [aut] (ORCID: <https://orcid.org/0000-0001-6563-3579>)",
  "Maintainer": "Noah Lorincz-Comi <njl96@case.edu>",
  "MD5sum": "249cecb989a239ab98943eeb7739f98e",
  "_user": "mrcieu",
  "_type": "src",
  "_file": "MRBEE_1.0.0.tar.gz",
  "_fileid": "b5475c70e0ceae87a6c5eb922fbcf4ecf59f0715deed031acfa63014911905b2",
  "_filesize": 6516507,
  "_sha256": "b5475c70e0ceae87a6c5eb922fbcf4ecf59f0715deed031acfa63014911905b2",
  "_created": "2026-05-16T05:53:43.000Z",
  "_published": "2026-06-02T18:52:59.718Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79147900471,
      "time": 151,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7030992266"
    },
    {
      "job": 79147900716,
      "time": 152,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7030992269"
    },
    {
      "job": 79147900495,
      "time": 151,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7030995804"
    },
    {
      "job": 79147900248,
      "time": 165,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7030994661"
    },
    {
      "job": 79147899694,
      "time": 194,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7030977802"
    },
    {
      "job": 79147899861,
      "time": 127,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7366991873"
    },
    {
      "job": 79147900497,
      "time": 133,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7030990961"
    },
    {
      "job": 79147900878,
      "time": 135,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7030990676"
    },
    {
      "job": 79147900849,
      "time": 131,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7030990280"
    }
  ],
  "_buildurl": "https://github.com/r-universe/mrcieu/actions/runs/25954297655",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/noahlorinczcomi/MRBEE",
  "_commit": {
    "id": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
    "author": "Harry Yihe Yang <96660799+harryyiheyang@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #9 from noahlorinczcomi/cli\n\nfeat: CLI",
    "time": 1778898938
  },
  "_maintainer": {
    "name": "Noah Lorincz-Comi",
    "email": "njl96@case.edu",
    "login": "noahlorinczcomi",
    "orcid": "0000-0002-0517-2499",
    "uuid": 39975632
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "data.table",
      "role": "Imports"
    },
    {
      "package": "FDRestimation",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "noahlorinczcomi",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-21",
      "n": 3
    },
    {
      "week": "2025-24",
      "n": 3
    },
    {
      "week": "2026-20",
      "n": 2
    }
  ],
  "_tags": [
    {
      "name": "v0.1.0",
      "date": "2025-06-12"
    }
  ],
  "_stars": 9,
  "_contributors": [
    {
      "user": "noahlorinczcomi",
      "count": 191,
      "uuid": 39975632
    },
    {
      "user": "remlapmot",
      "count": 16,
      "uuid": 3777473
    },
    {
      "user": "harryyiheyang",
      "count": 8,
      "uuid": 96660799
    }
  ],
  "_userbio": {
    "uuid": 15654827,
    "type": "organization",
    "name": "MRC Integrative Epidemiology Unit"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/MRBEE"
  },
  "_devurl": "https://github.com/noahlorinczcomi/mrbee",
  "_searchresults": 15,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/MRBEE.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "errorCov",
    "filter_align",
    "Joint.test",
    "MRBEE.IMRP",
    "MRBEE.IMRP.Egger",
    "MRBEE.IMRP.UV"
  ],
  "_datasets": [
    {
      "name": "hapmap3",
      "title": "HapMap3 and UKBB Genotype SNP Data",
      "object": "hapmap3",
      "class": [
        "data.table",
        "data.frame"
      ],
      "fields": [
        "SNP",
        "A1",
        "A2"
      ],
      "rows": 1664852,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "errorCov",
      "title": "Estimate Error Covariance Matrix Using GWAS Insignificant Effects",
      "topics": [
        "errorCov"
      ]
    },
    {
      "page": "filter_align",
      "title": "Filter and Align GWAS Data to a Reference Panel",
      "topics": [
        "filter_align"
      ]
    },
    {
      "page": "hapmap3",
      "title": "HapMap3 and UKBB Genotype SNP Data",
      "topics": [
        "hapmap3"
      ]
    },
    {
      "page": "Joint.test",
      "title": "Perform Joint Test on GWAS Summary Data",
      "topics": [
        "Joint.test"
      ]
    },
    {
      "page": "MRBEE.IMRP",
      "title": "Estimate Causal Effect with MRBEE",
      "topics": [
        "MRBEE.IMRP"
      ]
    },
    {
      "page": "MRBEE.IMRP.Egger",
      "title": "Estimate Causal Effect with MRBEE",
      "topics": [
        "MRBEE.IMRP.Egger"
      ]
    },
    {
      "page": "MRBEE.IMRP.UV",
      "title": "Univariable MR Estimation using MRBEE Method",
      "topics": [
        "MRBEE.IMRP.UV"
      ]
    }
  ],
  "_readme": "https://github.com/noahlorinczcomi/MRBEE/raw/HEAD/README.md",
  "_rundeps": [
    "data.table",
    "FDRestimation",
    "lattice",
    "MASS",
    "Matrix",
    "rbibutils",
    "Rdpack"
  ],
  "_score": 3.6074550232146687,
  "_indexed": false,
  "_nocasepkg": "mrbee",
  "_universes": [
    "mrcieu"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.0",
      "date": "2026-05-16T05:56:21.000Z",
      "distro": "noble",
      "commit": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
      "fileid": "5e1b5557a1572d8e05b65f16b542419e22179bd22442ed1e02eac81fbf1d1409",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/25954297655"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.0",
      "date": "2026-05-16T05:56:14.000Z",
      "distro": "noble",
      "commit": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
      "fileid": "e153e5a1b6cdf5a6d09547284f21c959ed362967fb63b89ad1a5e7006927c798",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/25954297655"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.0",
      "date": "2026-05-16T05:56:35.000Z",
      "commit": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
      "fileid": "a02cdf7d3393a247d625100b9177358317afc40092794c5889f8541a06dfff8d",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/25954297655"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.0",
      "date": "2026-05-16T05:56:23.000Z",
      "commit": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
      "fileid": "c16a84aa472faf36372665301de99e86ae607728b8a126b801ad963303195b46",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/25954297655"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-05-16T05:55:43.000Z",
      "commit": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
      "fileid": "3aa027116635e00c58313c41dabc164b91b6ea2ae9c2040a1221f846680d98ef",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/25954297655"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-05-16T05:55:47.000Z",
      "commit": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
      "fileid": "afed992735e040546a2d743b1bb1033ee0dd3453bfb2ed716391b911e15ce574",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/25954297655"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-05-16T05:55:40.000Z",
      "commit": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
      "fileid": "79889773a164d8ad082159dd9dc633ba9fb66d84e46e41d7815edbcb44804bc0",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/25954297655"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.0",
      "date": "2026-06-02T18:52:09.000Z",
      "commit": "07c060cac5e8c831dc3adfa2b9f8b1f4fdb04db3",
      "fileid": "61c2ffbd29c86435b83c12bc3d46e66ae45cea738e4404d7f2347a2106ac4a9a",
      "status": "success",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/25954297655"
    }
  ]
}