{
  "_id": "6a3b1b005cdecea1d68073b6",
  "Package": "hapsim",
  "Title": "Haplotype Data Simulation",
  "Version": "0.31",
  "Date": "2017-06-05",
  "Author": "Giovanni Montana",
  "Maintainer": "Apostolos Dimitromanolakis <apostolis@live.ca>",
  "Description": "Package for haplotype-based genotype simulations.\nHaplotypes are generated such that their allele frequencies and\nlinkage disequilibrium coefficients match those estimated from\nan input data set.",
  "License": "GPL (>= 2)",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-23 23:34:46 UTC",
    "User": "root"
  },
  "Repository": "https://mrcieu.r-universe.dev",
  "Date/Publication": "2017-06-07 20:40:03 UTC",
  "RemoteUrl": "https://github.com/cran/hapsim",
  "RemoteRef": "HEAD",
  "RemoteSha": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
  "MD5sum": "2007823745bc7aad89a852c7e44a5d7e",
  "_user": "mrcieu",
  "_type": "src",
  "_file": "hapsim_0.31.tar.gz",
  "_fileid": "3f5b2d6e2fd108c6f137b3b6f0e747dc4614d44c3cfc50ef705f158d35debf5f",
  "_filesize": 156451,
  "_sha256": "3f5b2d6e2fd108c6f137b3b6f0e747dc4614d44c3cfc50ef705f158d35debf5f",
  "_created": "2026-06-23T23:34:46.000Z",
  "_published": "2026-06-23T23:47:12.097Z",
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 83085451824,
      "time": 119,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7836277148"
    },
    {
      "job": 83085451876,
      "time": 117,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7836275927"
    },
    {
      "job": 83085451922,
      "time": 128,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7836279188"
    },
    {
      "job": 83085451862,
      "time": 113,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7836274970"
    },
    {
      "job": 83085451857,
      "time": 72,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7836393054"
    },
    {
      "job": 83085451835,
      "time": 219,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7836429186"
    },
    {
      "job": 83085451825,
      "time": 95,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7836395485"
    },
    {
      "job": 83085451823,
      "time": 152,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7836411195"
    },
    {
      "job": 83085103326,
      "time": 155,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7836242733"
    },
    {
      "job": 83085451790,
      "time": 96,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7836270531"
    },
    {
      "job": 83085451806,
      "time": 66,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7836262103"
    },
    {
      "job": 83085451820,
      "time": 63,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7836261346"
    },
    {
      "job": 83085451827,
      "time": 95,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7836269955"
    }
  ],
  "_buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/hapsim",
  "_commit": {
    "id": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
    "author": "Apostolos Dimitromanolakis <apostolis@live.ca>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.31\n",
    "time": 1496868003
  },
  "_maintainer": {
    "name": "Apostolos Dimitromanolakis",
    "email": "apostolis@live.ca"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "MASS",
      "role": "Depends"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_userbio": {
    "uuid": 15654827,
    "type": "organization",
    "name": "MRC Integrative Epidemiology Unit",
    "followers": 250
  },
  "_downloads": {
    "count": 33,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/hapsim"
  },
  "_mentions": 2,
  "_searchresults": 8,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/hapsim.html",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.1",
      "date": "2005-08-07"
    },
    {
      "version": "0.2",
      "date": "2012-10-29"
    },
    {
      "version": "0.3",
      "date": "2012-12-14"
    },
    {
      "version": "0.31",
      "date": "2017-06-07"
    }
  ],
  "_exports": [
    ".onload",
    ".onUnload",
    "allelefreqs",
    "checkpd",
    "cor2dprime",
    "cortocov",
    "covtocor",
    "divlocus",
    "haplodata",
    "haplofreqs",
    "haplosim",
    "ldplot",
    "makepd",
    "mergemats",
    "mse",
    "sumsqscale"
  ],
  "_datasets": [
    {
      "name": "ACEdata",
      "title": "ACE data set",
      "object": "ACEdata",
      "file": "ACEdata.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "SNP1",
        "SNP2",
        "SNP3",
        "SNP4",
        "SNP5",
        "SNP6",
        "SNP7",
        "SNP8",
        "SNP9",
        "SNP10",
        "SNP11",
        "SNP12",
        "SNP13",
        "SNP14",
        "SNP15",
        "SNP16",
        "SNP17",
        "SNP18",
        "SNP19",
        "SNP20",
        "SNP21",
        "SNP22",
        "SNP23",
        "SNP24",
        "SNP25",
        "SNP26",
        "SNP27",
        "SNP28",
        "SNP29",
        "SNP30",
        "SNP31",
        "SNP32",
        "SNP33",
        "SNP34",
        "SNP35",
        "SNP36",
        "SNP37",
        "SNP38",
        "SNP39",
        "SNP40",
        "SNP41",
        "SNP42",
        "SNP43",
        "SNP44",
        "SNP45",
        "SNP46",
        "SNP47",
        "SNP48",
        "SNP49",
        "SNP50",
        "SNP51",
        "SNP52"
      ],
      "rows": 22,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "ACEdata",
      "title": "ACE data set",
      "topics": [
        "ACEdata"
      ]
    },
    {
      "page": "allelefreqs",
      "title": "Estimates allele frequencies",
      "topics": [
        "allelefreqs"
      ]
    },
    {
      "page": "divlocus",
      "title": "Diversity score",
      "topics": [
        "divlocus"
      ]
    },
    {
      "page": "haplodata",
      "title": "Haplotype object creator",
      "topics": [
        "haplodata"
      ]
    },
    {
      "page": "haplofreqs",
      "title": "Haplotype frequencies",
      "topics": [
        "haplofreqs"
      ]
    },
    {
      "page": "haplosim",
      "title": "Haplotype data simulator",
      "topics": [
        "haplosim"
      ]
    },
    {
      "page": "ldplot",
      "title": "LD plot",
      "topics": [
        "ldplot"
      ]
    },
    {
      "page": "mergemats",
      "title": "Merges two LD matrices",
      "topics": [
        "mergemats"
      ]
    }
  ],
  "_rundeps": [
    "MASS"
  ],
  "_score": 1.3010299956639813,
  "_indexed": false,
  "_nocasepkg": "hapsim",
  "_universes": [
    "mrcieu"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.31",
      "date": "2026-06-23T23:36:56.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "344bd4ab000bebda0d1ca7c00fb8229eb64641157e5ba263ed70c864a5f82434",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.31",
      "date": "2026-06-23T23:36:48.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "205c0fa8a7692032d788502ffd8638f2dd29e14801eb1c55e8095022e761d8de",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.31",
      "date": "2026-06-23T23:37:03.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "0edd52b2240d32f978f0cb35ab2458f273f1e329765a6a6f8de40d0b428d57aa",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.31",
      "date": "2026-06-23T23:36:44.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "f533ca2f367b4685a50b21b30594569f1c016adb144e733a7db62a0b8aaa6133",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.31",
      "date": "2026-06-23T23:44:25.000Z",
      "arch": "aarch64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "856d7a92ac696852885c5eaf24acaa273bc64ec4f7e610f1f233ea35a56d79b8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.31",
      "date": "2026-06-23T23:46:36.000Z",
      "arch": "x86_64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "989551d8fecd2e258c4e9ae30a964cfb57284ac263f420803de4fe725740fb1e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.31",
      "date": "2026-06-23T23:44:29.000Z",
      "arch": "aarch64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "10d871dba8100eed6208e28cfcdbadc35923f9d293f732e6f784e99a8be80341",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.31",
      "date": "2026-06-23T23:45:24.000Z",
      "arch": "x86_64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "9e45e1fe89f4edaa9a357c3dd733aa95dc5e3fbbb31c6d25b92b465b4f34633d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.31",
      "date": "2026-06-23T23:36:37.000Z",
      "arch": "emscripten",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "be2877939db46d105e0b8b7f6d000a5d7f5edfe6365af1536b11b390bad569a7",
      "status": "success",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.31",
      "date": "2026-06-23T23:35:45.000Z",
      "arch": "x86_64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "cc42d0be82f6156f3a6bc8f885d303a1765847f6a224bb65019bb39eadb1bc65",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.31",
      "date": "2026-06-23T23:35:49.000Z",
      "arch": "x86_64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "92736d533f9b11695d1e33ecdabe892d76351e0928b7171a9acecb3e4b1ec824",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.31",
      "date": "2026-06-23T23:35:57.000Z",
      "arch": "x86_64",
      "commit": "a4fd4ef5e73ec3fab1d1a13f405b5a2f9f0b0120",
      "fileid": "af93d39de41cc7d436eaf5d53123642cfbf537003f3c7e09846062ee0fba441f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/28064261780"
    }
  ]
}