{ "_id": "6a22869ccd65a98ecbd53382", "Package": "mrclust", "Type": "Package", "Title": "Identifying Clustered Heterogeneity in Mendelian Randomization\nAnalyses", "Version": "0.1.0", "Author": "Christopher Neal Foley", "Maintainer": "The package maintainer ", "Description": "Performs likelihood based clustering on univariate\nobservations with known uncertainty (via standard error data),\nwhilst accounting for possible null and junk components in the\nsample.", "License": "GPL-3", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.1.1", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "cmake libgmp3-dev make libicu-dev libuv1-dev\nlibssl-dev", "Repository": "https://mrcieu.r-universe.dev", "Date/Publication": "2021-10-15 08:06:49 UTC", "RemoteUrl": "https://github.com/cnfoley/mrclust", "RemoteRef": "HEAD", "RemoteSha": "039ed855bda28b76195222a8ddd2b7b5041b775b", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-05 08:16:50 UTC", "User": "root" }, "MD5sum": "4ce63ba81518ba4ef51b9b34786c0a56", "_user": "mrcieu", "_type": "src", "_file": "mrclust_0.1.0.tar.gz", "_fileid": "9ae0daee9dda722328f59d2f10d9fd2095bbe10d5cbce324d328d5349b876f09", "_filesize": 140556, "_sha256": "9ae0daee9dda722328f59d2f10d9fd2095bbe10d5cbce324d328d5349b876f09", "_created": "2026-06-05T08:16:50.000Z", "_published": "2026-06-05T08:19:40.199Z", "_distro": "noble", "_jobs": [ { "job": 79690322272, "time": 136, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "7432013742" }, { "job": 79690322334, "time": 142, "config": "linux-release-x86_64", "r": "4.6.0", "check": "WARNING", "artifact": "7432015493" }, { "job": 79690322244, "time": 106, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "WARNING", "artifact": "7432004797" }, { "job": 79690322264, "time": 95, "config": "macos-release-arm64", "r": "4.6.0", "check": "WARNING", "artifact": "7432001962" }, { "job": 79689516674, "time": 335, "config": "source", "r": "4.6.0", "check": "ERROR", "artifact": "7431974442" }, { "job": 79690322178, "time": 125, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7432010441" }, { "job": 79690322294, "time": 84, "config": "windows-devel", "r": "4.7.0", "check": "WARNING", "artifact": "7431998823" }, { "job": 79690322300, "time": 130, "config": "windows-oldrel", "r": "4.5.3", "check": "WARNING", "artifact": "7432011964" }, { "job": 79690322306, "time": 72, "config": "windows-release", "r": "4.6.0", "check": "WARNING", "artifact": "7431995072" } ], "_buildurl": "https://github.com/r-universe/mrcieu/actions/runs/27003550045", "_status": "failure", "_host": "GitHub-Actions", "_upstream": "https://github.com/cnfoley/mrclust", "_commit": { "id": "039ed855bda28b76195222a8ddd2b7b5041b775b", "author": "cnfoley ", "committer": "cnfoley ", "message": "rm jnk optional fnc\n", "time": 1634285209 }, "_maintainer": { "name": "The package maintainer", "email": "chris.neal.foley@gmail.com", "login": "cnfoley", "description": "Data scientist - PhD mathematics and MSc statistics - developing machine learning algorithms for real-world use, typically computational drug discovery.", "uuid": 47319125 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5", "role": "Depends" }, { "package": "ggplot2", "role": "Imports" }, { "package": "RColorBrewer", "role": "Imports" }, { "package": "MendelianRandomization", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "data.table", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "cnfoley", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 18, "_contributors": [ { "user": "amymariemason", "count": 14, "uuid": 19505214 }, { "user": "cnfoley", "count": 11, "uuid": 47319125 } ], "_userbio": { "uuid": 15654827, "type": "organization", "name": "MRC Integrative Epidemiology Unit" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/mrclust" }, "_devurl": "https://github.com/cnfoley/mrclust", "_searchresults": 16, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/mrclust.html", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_cranurl": false, "_exports": [ "mr_clust_em", "pr_clust", "two_stage_plot" ], "_datasets": [ { "name": "DBP_CAD", "title": "Genetic association data from diastolic blood pressure (DBP) and coronary artery disease (CAD) GWAS.", "object": "DBP_CAD", "class": [ "data.frame" ], "fields": [ "chr.pos", "rsid", "bx", "bxse", "by", "byse", "a1", "a2" ], "rows": 119, "table": true, "tojson": true }, { "name": "PP_CAD", "title": "Genetic association data from pulse pressure (PP) and coronary artery disease (CAD) GWAS.", "object": "PP_CAD", "class": [ "data.frame" ], "fields": [ "chr.pos", "rsid", "bx", "bxse", "by", "byse", "a1", "a2" ], "rows": 85, "table": true, "tojson": true }, { "name": "SBP_CAD", "title": "Genetic association data from systolic blood pressure (SBP) and coronary artery disease (CAD) GWAS.", "object": "SBP_CAD", "class": [ "data.frame" ], "fields": [ "chr.pos", "rsid", "bx", "bxse", "by", "byse", "a1", "a2" ], "rows": 121, "table": true, "tojson": true } ], "_help": [ { "page": "DBP_CAD", "title": "Genetic association data from diastolic blood pressure (DBP) and coronary artery disease (CAD) GWAS.", "topics": [ "DBP_CAD" ] }, { "page": "mr_clust_em", "title": "MR-Clust mixture model fitting", "topics": [ "mr_clust_em" ] }, { "page": "PP_CAD", "title": "Genetic association data from pulse pressure (PP) and coronary artery disease (CAD) GWAS.", "topics": [ "PP_CAD" ] }, { "page": "pr_clust", "title": "Cluster size and assignemnt probabilities", "topics": [ "pr_clust" ] }, { "page": "SBP_CAD", "title": "Genetic association data from systolic blood pressure (SBP) and coronary artery disease (CAD) GWAS.", "topics": [ "SBP_CAD" ] }, { "page": "two_stage_plot", "title": "Plotting clustered ratio-estimates", "topics": [ "two_stage_plot" ] } ], "_readme": "https://github.com/cnfoley/mrclust/raw/HEAD/README.md", "_rundeps": [ "arrangements", "askpass", "base64enc", "bslib", "cachem", "cli", "codetools", "cpp11", "crosstalk", "curl", "data.table", "DEoptimR", "digest", "dplyr", "evaluate", "farver", "fastmap", "fontawesome", "foreach", "fs", "generics", "ggplot2", "glmnet", "glue", "gmp", "gtable", "highr", "htmltools", "htmlwidgets", "httr", "isoband", "iterators", "iterpc", "jquerylib", "jsonlite", "knitr", "labeling", "later", "lattice", "lazyeval", "lifecycle", "magrittr", "MASS", "Matrix", "MatrixModels", "memoise", "MendelianRandomization", "mime", "numDeriv", "openssl", "otel", "pillar", "pkgconfig", "plotly", "promises", "purrr", "quantreg", "R6", "rappdirs", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppEigen", "rjson", "rlang", "rmarkdown", "robustbase", "S7", "sass", "scales", "shape", "SparseM", "stringi", "stringr", "survival", "sys", "tibble", "tidyr", "tidyselect", "tinytex", "utf8", "vctrs", "viridisLite", "withr", "xfun", "yaml" ], "_score": 3.1583624920952493, "_indexed": false, "_nocasepkg": "mrclust", "_universes": [ "mrcieu" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-06-05T08:19:07.000Z", "distro": "noble", "commit": "039ed855bda28b76195222a8ddd2b7b5041b775b", "fileid": "e3de4e7fd67b5f6552a7a529b8df317f387c87089a9d123da2870109dbf34ccc", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/27003550045" }, { "r": "4.6.0", "os": "linux", "version": "0.1.0", "date": "2026-06-05T08:19:12.000Z", "distro": "noble", "commit": "039ed855bda28b76195222a8ddd2b7b5041b775b", "fileid": "e41863a3b67d215d73ba9131a6e64a6821fb21fe046e47f89564988741874f6b", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/27003550045" }, { "r": "4.5.3", "os": "mac", "version": "0.1.0", "date": "2026-06-05T08:18:38.000Z", "commit": "039ed855bda28b76195222a8ddd2b7b5041b775b", "fileid": "a4cb111d74ccad265612f13f25da2044fe47b2cb04a40de856228474d3bf06b3", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/27003550045" }, { "r": "4.6.0", "os": "mac", "version": "0.1.0", "date": "2026-06-05T08:18:28.000Z", "commit": "039ed855bda28b76195222a8ddd2b7b5041b775b", "fileid": "0dd188032ee30dac22eda41b5bc9aa1cb6b5374a91017113ef0a821924e20d46", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/27003550045" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-06-05T08:19:08.000Z", "commit": "039ed855bda28b76195222a8ddd2b7b5041b775b", "fileid": "4731084edc78365e72942ff396b6b71195ec605448efee3d536d7e638b72c0fe", "status": "success", "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/27003550045" }, { "r": "4.7.0", "os": "win", "version": "0.1.0", "date": "2026-06-05T08:18:11.000Z", "commit": "039ed855bda28b76195222a8ddd2b7b5041b775b", "fileid": "7c7c6b02a69eeeca2b9ff01363075143be35db7779812281ea266061c7c2f99c", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/27003550045" }, { "r": "4.5.3", "os": "win", "version": "0.1.0", "date": "2026-06-05T08:18:56.000Z", "commit": "039ed855bda28b76195222a8ddd2b7b5041b775b", "fileid": "95b2da613834ebd21db6c1c234d4e148f0ebb5cfdbdfe9c2b47cd85a485d5cd2", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/27003550045" }, { "r": "4.6.0", "os": "win", "version": "0.1.0", "date": "2026-06-05T08:17:58.000Z", "commit": "039ed855bda28b76195222a8ddd2b7b5041b775b", "fileid": "88e04952943c2e9f2e02ad469d662bf9721c8eb0c86a67d2cec519a1909ebcf0", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/mrcieu/actions/runs/27003550045" } ] }