NEWS

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epigraphdb 0.2.3 (2022-01-14)

• Error handling logics have been overhauled.
  • Now it is easier to see the context when a request function fails
• Vignettes on case studies of using EpiGraphDB functionalities have been moved to EpiGraphDB's platform documentation. This is to make the package building process faster and less error prone. Specifically, it involves these vignette articles:
  • Case 1 pleiotropy
  • Case 2 alternative drug target
  • Case 3 literature triangulation
• (For developers) Added docker for package development in a portable and consistent development environment.

epigraphdb 0.2.2 (2021-03-29)

• Switch to github actions for building the package documentation site.
• Switch to EpiGraphDB v1.0.0 API.

epigraphdb 0.2.1 (2020-08-26)

• use httr::RETRY to mitigate problems due to network errors.
• Shortened the startup message.
• Added functions protein_in_pathway, mappings_gene_to_protein
• Added RMarkdown vignettes to the equivalent Jupyter notebooks in the EpiGraphDB GitHub repo.
• Added functions meta_nodes_list, meta_rels_list, meta_nodes_list_node, meta_rels_list_rel, meta_nodes_search_node, cypher

epigraphdb 0.2

• Migrated to EpiGraphDB v0.3.0 API.

epigraphdb 0.1.0.9

Current ongoing development

• (2020-03) Move upstream API url to https://api.epigraphdb.org/v0.2.0
• (2019-11) Migrated to github and travis CI. Current documentation site is now https://mrcieu.github.io/epigraphdb-r.

epigraphdb 0.1

Initial release on github

epigraphdb 0.0.0.9000

Initial pre-development