Package: gwasvcf
Title: Tools for Dealing with GWAS Summary Data in VCF Format
Version: 0.1.6
Authors@R: c(
    person("Gibran", "Hemani", , "g.hemani@bristol.ac.uk", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0003-0920-1055")),
    person("Tom", "Palmer", , "tom.palmer@bristol.ac.uk", role = "ctb",
           comment = c(ORCID = "0000-0003-4655-4511")),
    person("Rita", "Rasteiro", , "rita.rasteiro@bristol.ac.uk", role = "ctb",
           comment = c(ORCID = "0000-0002-4217-3060"))
  )
Description: Tools for dealing with GWAS summary data in VCF format.
        Includes reading, querying, writing, as well as helper
        functions such as LD proxy searches.
License: MIT + file LICENSE
URL: https://github.com/mrcieu/gwasvcf,
        https://mrcieu.github.io/gwasvcf/
BugReports: https://github.com/mrcieu/gwasvcf/issues
Depends: R (>= 4.0.0)
Imports: BiocGenerics, Biostrings, data.table, dplyr,
        genetics.binaRies, GenomeInfoDb, GenomicRanges, gwasglue2,
        IRanges, magrittr, RCurl, rlang, Rsamtools, RSQLite, S4Vectors,
        stringr, SummarizedExperiment, utils, VariantAnnotation
Suggests: knitr, rmarkdown, testthat
VignetteBuilder: knitr
Remotes: github::mrcieu/genetics.binaRies, github::mrcieu/gwasglue2
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
SystemRequirements: GNU unzip, sqlite3
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev libsqlite3-dev xz-utils zlib1g-dev
Repository: https://mrcieu.r-universe.dev
Date/Publication: 2026-03-16 10:25:32 UTC
RemoteUrl: https://github.com/MRCIEU/gwasvcf
RemoteRef: HEAD
RemoteSha: 53daf45a1e6decb255794877fd50a80c25618fce
NeedsCompilation: no
Packaged: 2026-05-28 14:52:04 UTC; root
Author: Gibran Hemani [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-0920-1055>),
  Tom Palmer [ctb] (ORCID: <https://orcid.org/0000-0003-4655-4511>),
  Rita Rasteiro [ctb] (ORCID: <https://orcid.org/0000-0002-4217-3060>)
Maintainer: Gibran Hemani <g.hemani@bristol.ac.uk>