Package: mrpipeline
Type: Package
Title: Implements a Ready-for-Use Mendelian Randomisation Pipeline
Version: 0.1.0
Author: Jamie Robinson
Maintainer: Jamie Robinson <jamie.robinson@biogen.com>
Description: This package implements a pipeline which in turns allows
        for simple and generally "hands-free" Mendelian randomisation
        analyses to be run. Data may be used from the OpenGWAS DB or
        locally, using .vcf files. Analyses include MR, colocalisation
        and standard MR sensitivity analyses. Please see the
        documentation for more details.
License: What license is it under?
Encoding: UTF-8
Depends: R (>= 3.6.0)
Imports: TwoSampleMR, ieugwasr, gwasglue, gwasvcf, epigraphdb, coloc,
        tools, utils, jsonlite, dplyr, plyr, tidyr, tibble, ggplot2,
        gassocplot, parallel, VariantAnnotation, magrittr
Remotes: github::MRCIEU/TwoSampleMR, github::MRCIEU/ieugwasr,
        github::MRCIEU/gwasglue, github::MRCIEU/gwasvcf,
        github::jrs95/gassocplot, bioc::3.12/VariantAnnotation
RoxygenNote: 7.1.2
Suggests: plotly, biomaRt, knitr, rmarkdown
VignetteBuilder: knitr
Repository: https://mrcieu.r-universe.dev
Date/Publication: 2022-09-25 12:07:00 UTC
RemoteUrl: https://github.com/jwr-git/mrpipeline
RemoteRef: HEAD
RemoteSha: 2c84a8deaa86703718743cddb57fc8815fc8202d
NeedsCompilation: no
Packaged: 2026-06-24 10:43:36 UTC; root