Package: MRInstruments 0.3.2
Gibran Hemani
MRInstruments: Data sources for genetic instruments to be used in MR
Datasets of eQTLs, GWAS catalogs, etc.
Authors:
MRInstruments_0.3.2.tar.gz
MRInstruments_0.3.2.zip(r-4.5)MRInstruments_0.3.2.zip(r-4.4)MRInstruments_0.3.2.zip(r-4.3)
MRInstruments_0.3.2.tgz(r-4.4-any)MRInstruments_0.3.2.tgz(r-4.3-any)
MRInstruments_0.3.2.tar.gz(r-4.5-noble)MRInstruments_0.3.2.tar.gz(r-4.4-noble)
MRInstruments_0.3.2.tgz(r-4.4-emscripten)MRInstruments_0.3.2.tgz(r-4.3-emscripten)
MRInstruments.pdf |MRInstruments.html✨
MRInstruments/json (API)
| # Install 'MRInstruments' in R: |
| install.packages('MRInstruments', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mrcieu/mrinstruments/issues
Datasets:
- aries_mqtl - Data frame of mQTLs from ARIES study
- blueprint_monocyte_eqtl - Data frame of eQTLs (monocyte cells) from the BLUEPRINT study
- drug_interactions - Drug interactions
- gene_trials - Drug trial information regarding target genes
- gtex_eqtl - Data frame of cis-eQTLs from GTEx study
- gwas_catalog - Data frame of GWAS significant SNPs obtained from the EBI GWAS catalog
- metab_qtls - Data frame of QTLs of metabolites
- mrbase_instruments - Data frame of GWAS significant SNPs obtained from the EBI GWAS catalog
- proteomic_qtls - Data frame of proteomic QTLs from Deming et al 2016
Last updated 4 years agofrom:efa2ca0d7a. Checks:OK: 1 WARNING: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 30 2024 |
| R-4.5-win | WARNING | Sep 30 2024 |
| R-4.5-linux | WARNING | Sep 30 2024 |
| R-4.4-win | WARNING | Sep 30 2024 |
| R-4.4-mac | WARNING | Sep 30 2024 |
| R-4.3-win | WARNING | Sep 30 2024 |
| R-4.3-mac | WARNING | Sep 30 2024 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Data frame of mQTLs from ARIES study | aries_mqtl |
| Data frame of eQTLs (monocyte cells) from the BLUEPRINT study | blueprint_monocyte_eqtl |
| Drug interactions | drug_interactions |
| Drug trial information regarding target genes | gene_trials |
| Data frame of cis-eQTLs from GTEx study (version 6p) | gtex_eqtl |
| Data frame of GWAS significant SNPs obtained from the EBI GWAS catalog | gwas_catalog |
| Data frame of QTLs of metabolites | metab_qtls |
| Data frame of GWAS significant SNPs obtained from the EBI GWAS catalog | mrbase_instruments |
| Data frame of proteomic QTLs from Deming et al 2016 | proteomic_qtls |
