Package: MRPATH 1.0
MRPATH: R Package for MR-PATH
This package implements methods for fitting the MR-PATH model.
Authors:
MRPATH_1.0.tar.gz
MRPATH_1.0.zip(r-4.5)MRPATH_1.0.zip(r-4.4)MRPATH_1.0.zip(r-4.3)
MRPATH_1.0.tgz(r-4.4-x86_64)MRPATH_1.0.tgz(r-4.4-arm64)MRPATH_1.0.tgz(r-4.3-x86_64)MRPATH_1.0.tgz(r-4.3-arm64)
MRPATH_1.0.tar.gz(r-4.5-noble)MRPATH_1.0.tar.gz(r-4.4-noble)
MRPATH_1.0.tgz(r-4.4-emscripten)MRPATH_1.0.tgz(r-4.3-emscripten)
MRPATH.pdf |MRPATH.html✨
MRPATH/json (API)
# Install 'MRPATH' in R: |
install.packages('MRPATH', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/remlapmot/mrpath/issues
Last updated 8 months agofrom:cbb7958091 (on suggestions). Checks:OK: 1 WARNING: 8. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 31 2024 |
R-4.5-win-x86_64 | WARNING | Oct 31 2024 |
R-4.5-linux-x86_64 | WARNING | Oct 31 2024 |
R-4.4-win-x86_64 | WARNING | Oct 31 2024 |
R-4.4-mac-x86_64 | WARNING | Oct 31 2024 |
R-4.4-mac-aarch64 | WARNING | Oct 31 2024 |
R-4.3-win-x86_64 | WARNING | Oct 31 2024 |
R-4.3-mac-x86_64 | WARNING | Oct 31 2024 |
R-4.3-mac-aarch64 | WARNING | Oct 31 2024 |
Exports:computeClusterMembProbcomputeQgetImportanceSamplesloo.cvMR_PATHMR_PATHaltMREM.plotParamTrajMREMalt.scatterplotMRPATH_barplotMRPATH_optimizeInitValsMRPATH_scatterplotMRPATH_selectModelsampleBetasselectModelselectModel_stan
Dependencies:askpassbase64encbslibcachemclicolorspacecowplotcpp11crosstalkcurldata.tabledigestdplyrevaluatefansifarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhtmltoolshtmlwidgetshttrisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopensslpillarpkgconfigplotlyplyrpromisespurrrR6rappdirsrbibutilsRColorBrewerRcppRcppArmadilloRcppDistRdpackreshape2rlangrmarkdownsassscalesstringistringrsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunyaml
Readme and manuals
Help Manual
Help page | Topics |
---|---|
MR-PATH: A Latent Mixture for Heterogenous Causal Mechanisms in Mendelian Randomization | MRPATH-package MRPATH |
Effect of Body Mass Index (BMI) on Type-2 Diabetes (T2D) | bmi_t2d |
Cluster membership probabilities in MR-PATH | computeClusterMembProb |
Importance Sampling of SNP-specific latent variables in MR-PATH | getImportanceSamples |
Effect of HDL Cholesterol (HDL-C) on Coronary Heart Disease (CHD) | hdl_chd |
MR-PATH Model Fitting | MR_PATH |
MR-PATH Bar Plot | MRPATH_barplot |
MR-PATH Initial Value Optimizer | MRPATH_optimizeInitVals |
MR-PATH Scatter Plot | MRPATH_scatterplot |
Model selection for MR-PATH model using a modified BIC criterion. | MRPATH_selectModel |
Probabilistic inference for SNP-specific causal effects in MR-PATH | sampleBetas |