remlapmot. To fix this you can add URL: https://mrcieu.r-universe.dev/MRTool to the package DESCRIPTION file. See also theR-universe documentation.Package: MRTool 0.0.0.9000
MRTool: Simulating Data for Mendelian Randomization Scenarios Based on Genotype Data
This package can be used to simulate data in R for Mendelian Randomization scenarios including confounder, exposure and outcome. Recommended MR package is MendelianRandomization.
Authors:
MRTool_0.0.0.9000.tar.gz
MRTool_0.0.0.9000.zip(r-4.7)MRTool_0.0.0.9000.zip(r-4.6)MRTool_0.0.0.9000.zip(r-4.5)
MRTool_0.0.0.9000.tgz(r-4.6-any)MRTool_0.0.0.9000.tgz(r-4.5-any)
MRTool_0.0.0.9000.tar.gz(r-4.7-any)MRTool_0.0.0.9000.tar.gz(r-4.6-any)
MRTool_0.0.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MRTool/json (API)
| # Install 'MRTool' in R: |
| install.packages('MRTool', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/remlapmot/mrtool/issues
Last updated from:4af89980d5 (on suggestions). Checks:7 WARNING, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | WARNING | 138 | ||
| source / vignettes | OK | 224 | ||
| linux-release-x86_64 | WARNING | 136 | ||
| macos-release-arm64 | WARNING | 102 | ||
| macos-oldrel-arm64 | WARNING | 109 | ||
| windows-devel | WARNING | 79 | ||
| windows-release | WARNING | 116 | ||
| windows-oldrel | WARNING | 95 | ||
| wasm-release | OK | 125 |
Exports:cal_betasCreateMRInputObjectget_corrsSetMRParamssim_and_mrSimulateMRDatatransform_results
Dependencies:arrangementsaskpassbackportsbase64encbroombslibcachemclicodetoolscpp11crosstalkcurldata.tableDEoptimRdigestdplyrevaluatefarverfastmapfontawesomeforeachfsgenericsggplot2glmnetgluegmpgtablehighrhtmltoolshtmlwidgetshttrisobanditeratorsiterpcjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixMatrixModelsmemoiseMendelianRandomizationmimenumDerivopensslotelpillarpkgconfigplotlypromisespurrrquantregR6rappdirsRColorBrewerRcppRcppArmadilloRcppEigenrjsonrlangrmarkdownrobustbaseS7sassscalesshapeSparseMstringistringrsurvivalsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| calculates betacoefficients from explained variances | cal_betas |
| Create MRInput Object | CreateMRInputObject |
| calculate correlation for a datatable of snps | get_corrs |
| MRTool: A package to simulate data for mendelian randomization | MRTool-package MRTool |
| Set MR Parameters (betacoefficients) | SetMRParams |
| Simulate U,X and Y and run MR on them | sim_and_mr |
| Simulate MR Data | SimulateMRData |
| Transform result of iterations of simulation and MR | transform_results |
