Package: locuscomparer 1.0.0

Boxiang Liu

locuscomparer: locuscomparer: Visualization of GWAS-QTL Colocalization Events

locuscomparer is the standalone version of the LocusCompare webserver (www.locuscompare.ml:3838). locuscomparer performs visualization of colocalization of summary statistics from pairs of association datasets (e.g. GWAS and eQTL).

Authors:Boxiang Liu [aut, cre], Michael Gloudemans [ctb], Stephen Montgomery [ctb]

locuscomparer_1.0.0.tar.gz
locuscomparer_1.0.0.zip(r-4.7-any)locuscomparer_1.0.0.zip(r-4.6-any)locuscomparer_1.0.0.zip(r-4.5-any)
locuscomparer_1.0.0.tgz(r-4.6-any)locuscomparer_1.0.0.tgz(r-4.5-any)
locuscomparer_1.0.0.tar.gz(r-4.7-any)locuscomparer_1.0.0.tar.gz(r-4.6-any)
locuscomparer_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
locuscomparer/json (API)

# Install 'locuscomparer' in R:
install.packages('locuscomparer', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/remlapmot/locuscomparer/issues

Datasets:

On CRAN:

Conda:

1.70 score 10 exports 22 dependencies

Last updated from:208d7fae39 (on suggestions). Checks:7 ERROR, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develERROR157
source / vignettesOK193
linux-releaseERROR138
macos-releaseERROR103
macos-oldrelERROR84
windows-develERROR69
windows-releaseERROR88
windows-oldrelERROR74
wasm-releaseOK112

Exports:add_labelassign_colorget_lead_snpget_positionlocuscomparemake_combined_plotmake_locuszoommake_scatterplotread_metalretrieve_LD

Dependencies:clicowplotcpp11DBIfarverggplot2ggrepelgluegtableisobandlabelinglifecycleR6RColorBrewerRcpprlangRMySQLS7scalesvctrsviridisLitewithr