Package: CAMeRa 0.1.0
CAMeRa: CAMeRa (Cross Ancestral Mendelian Randomisation)
CAMERA estimates joint causal effect in multiple ancestries and detects pleiotropy via the zero relevance model.
Authors:
CAMeRa_0.1.0.tar.gz
CAMeRa_0.1.0.zip(r-4.5)CAMeRa_0.1.0.zip(r-4.4)CAMeRa_0.1.0.zip(r-4.3)
CAMeRa_0.1.0.tgz(r-4.4-any)CAMeRa_0.1.0.tgz(r-4.3-any)
CAMeRa_0.1.0.tar.gz(r-4.5-noble)CAMeRa_0.1.0.tar.gz(r-4.4-noble)
CAMeRa_0.1.0.tgz(r-4.4-emscripten)CAMeRa_0.1.0.tgz(r-4.3-emscripten)
CAMeRa.pdf |CAMeRa.html✨
CAMeRa/json (API)
# Install 'CAMeRa' in R: |
install.packages('CAMeRa', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mrcieu/camera/issues
causal-inferencegwas-summary-statisticsmendelian-randomisationmulti-ancestry
Last updated 8 months agofrom:fc705d5e9c. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 31 2024 |
R-4.5-win | OK | Oct 31 2024 |
R-4.5-linux | OK | Oct 31 2024 |
R-4.4-win | OK | Oct 31 2024 |
R-4.4-mac | OK | Oct 31 2024 |
R-4.3-win | OK | Oct 31 2024 |
R-4.3-mac | OK | Oct 31 2024 |
Exports:%>%CAMERACAMERA_localegger_bootstrapfixed_effects_meta_analysisfixed_effects_meta_analysis_fastidentify_blownup_estimates
Dependencies:askpassclicolorspacecpp11curldplyrfansifarvergenericsggplot2gluegtablehttrieugwasrisobandjsonlitelabelinglatticelifecyclemagrittrMASSMatrixmgcvmimemunsellnlmeopensslpillarpkgconfigpurrrR6RColorBrewerrlangscalesstringistringrsystibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
R6 class for CAMERA | CAMERA |
CAMERA_local class | CAMERA_local |
Perform MR GxE | egger_bootstrap |
Perform fixed effects meta analysis for one association | fixed_effects_meta_analysis |
Fixed effects meta analysis vectorised across multiple SNPs | fixed_effects_meta_analysis_fast |
Identify blown up estimates | identify_blownup_estimates |
Estimate expected vs observed replication of effects between discovery and replication datasets | prop_overlap |
P-value based meta analysis | z_meta_analysis |