Package: MRAPSS 0.0.0.9000

Xianghong HU

MRAPSS: The MRAPSS package implement the MR-APPSS approach to test for the causal effect of an exposure on a outcome disease.

The MRAPSS package implement the MR-APPSS approach to test for the causal effects between an exposure and a outcome disease. The MR-APPSS is a unified approach to Mendelian Randomization accounting for polygenicity, pleiotropy and sample structure using genome-wide summary statistics. Specifically, MR-APPSS uses a background-foreground model to characterize both SNP-exposure effects and SNP-outcome effects estimates, where the background model accounts for confounding from genetic correlation and sample structure and the foreground model captures the valid signal for causal inference.

Authors:Xianghong HU [aut, cre]

MRAPSS_0.0.0.9000.tar.gz
MRAPSS_0.0.0.9000.zip(r-4.7)MRAPSS_0.0.0.9000.zip(r-4.6)MRAPSS_0.0.0.9000.zip(r-4.5)
MRAPSS_0.0.0.9000.tgz(r-4.6-any)MRAPSS_0.0.0.9000.tgz(r-4.5-any)
MRAPSS_0.0.0.9000.tar.gz(r-4.7-any)MRAPSS_0.0.0.9000.tar.gz(r-4.6-any)
MRAPSS_0.0.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
MRAPSS/json (API)

# Install 'MRAPSS' in R:
install.packages('MRAPSS', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/yanglabhkust/mr-apss/issues

On CRAN:

Conda:

3.89 score 43 stars 36 scripts 8 exports 47 dependencies

Last updated from:7f390066ea. Checks:7 ERROR, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64ERROR206
source / vignettesOK214
linux-release-x86_64ERROR145
macos-release-arm64ERROR93
macos-oldrel-arm64ERROR88
windows-develERROR107
windows-releaseERROR100
windows-oldrelERROR133
wasm-releaseOK117

Exports:clumpest_parasformat_dataMR_EM_fix_rf_funcMR_fix_rfMRAPSSMRplotsensitivity

Dependencies:askpassbitbit64clicliprcpp11crayoncurldplyrexpmfarvergenericsggnewscaleggplot2gluegtablehmshttrieugwasrisobandjsonlitelabelinglatticelifecyclemagrittrMatrixmimeopensslpillarpkgconfigprettyunitsprogressR6RColorBrewerreadrrlangS7scalessystibbletidyselecttzdbutf8vctrsviridisLitevroomwithr