Package: OneSampleMR 0.1.5.9000
Tom Palmer
OneSampleMR: One Sample Mendelian Randomization and Instrumental Variable Analyses
Useful functions for one-sample (individual level data) Mendelian randomization and instrumental variable analyses. The package includes implementations of; the Sanderson and Windmeijer (2016) <doi:10.1016/j.jeconom.2015.06.004> conditional F-statistic, the multiplicative structural mean model Hernán and Robins (2006) <doi:10.1097/01.ede.0000222409.00878.37>, and two-stage predictor substitution and two-stage residual inclusion estimators explained by Terza et al. (2008) <doi:10.1016/j.jhealeco.2007.09.009>.
Authors:
OneSampleMR_0.1.5.9000.tar.gz
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OneSampleMR_0.1.5.9000.tgz(r-4.4-any)OneSampleMR_0.1.5.9000.tgz(r-4.3-any)
OneSampleMR_0.1.5.9000.tar.gz(r-4.5-noble)OneSampleMR_0.1.5.9000.tar.gz(r-4.4-noble)
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OneSampleMR.pdf |OneSampleMR.html✨
OneSampleMR/json (API)
NEWS
| # Install 'OneSampleMR' in R: |
| install.packages('OneSampleMR', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/remlapmot/onesamplemr/issues
instrumental-variableinstrumental-variablesmendelian-randomisationmendelian-randomizationmendelianrandomisationmendelianrandomization
Last updated 3 months agofrom:2327d78bc7. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 26 2024 |
| R-4.5-win | OK | Oct 26 2024 |
| R-4.5-linux | OK | Oct 26 2024 |
| R-4.4-win | OK | Oct 26 2024 |
| R-4.4-mac | OK | Oct 26 2024 |
| R-4.3-win | OK | Oct 26 2024 |
| R-4.3-mac | OK | Oct 26 2024 |
Dependencies:abindbackportsbootbroomcarcarDataclicolorspacecowplotcpp11DerivdoBydplyrexpmfansifarverFormulagenericsggplot2gluegmmgtableisobandivreglabelinglatticelifecyclelme4lmtestmagrittrMASSMatrixMatrixModelsmgcvmicrobenchmarkminqamodelrmsmmunsellmvtnormnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpurrrquantregR6RColorBrewerRcppRcppEigenrlangsandwichscalesSparseMstringistringrsurvivaltibbletidyrtidyselectutf8vctrsviridisLitewithrzoo
Comparison fits of the multiplicative structural mean model
Rendered fromcompare-smm-fits.Rmdusingknitr::rmarkdownon Oct 26 2024.Last update: 2024-08-27
Started: 2021-08-19
Comparison of conditional F-statistics
Rendered fromf-statistic-comparison.Rmdusingknitr::rmarkdownon Oct 26 2024.Last update: 2024-08-27
Started: 2021-08-19
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| OneSampleMR: One Sample Mendelian Randomization and Instrumental Variable Analyses | OneSampleMR-package OneSampleMR onesamplemr |
| Additive structural mean model | asmm |
| Conditional F-statistic of Sanderson and Windmeijer (2016) | fsw fsw.ivreg |
| Multiplicative structural mean model | msmm |
| Summarizing MSMM Fits | print.msmm print.summary.msmm summary.msmm |
| Summarizing TSPS Fits | print.summary.tsps print.tsps summary.tsps |
| Summarizing TSRI Fits | print.summary.tsri print.tsri summary.tsri |
| Two-stage predictor substitution (TSPS) estimators | tsps |
| Two-stage residual inclusion (TSRI) estimators | tsri |
