cran. To fix this you can add URL: https://mrcieu.r-universe.dev/hapsim to the package DESCRIPTION file. See also theR-universe documentation.Package: hapsim 0.31

Apostolos Dimitromanolakis
hapsim: Haplotype Data Simulation
Package for haplotype-based genotype simulations. Haplotypes are generated such that their allele frequencies and linkage disequilibrium coefficients match those estimated from an input data set.
Authors:
hapsim_0.31.tar.gz
hapsim_0.31.zip(r-4.7)hapsim_0.31.zip(r-4.6)hapsim_0.31.zip(r-4.5)
hapsim_0.31.tgz(r-4.6-x86_64)hapsim_0.31.tgz(r-4.6-arm64)hapsim_0.31.tgz(r-4.5-x86_64)hapsim_0.31.tgz(r-4.5-arm64)
hapsim_0.31.tar.gz(r-4.7-arm64)hapsim_0.31.tar.gz(r-4.7-x86_64)hapsim_0.31.tar.gz(r-4.6-arm64)hapsim_0.31.tar.gz(r-4.6-x86_64)
hapsim_0.31.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
hapsim/json (API)
| # Install 'hapsim' in R: |
| install.packages('hapsim', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org')) |
- ACEdata - ACE data set
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:a4fd4ef5e7. Checks:13 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 142 | ||
| linux-devel-x86_64 | OK | 154 | ||
| source / vignettes | OK | 151 | ||
| linux-release-arm64 | OK | 107 | ||
| linux-release-x86_64 | OK | 101 | ||
| macos-release-arm64 | OK | 89 | ||
| macos-release-x86_64 | OK | 188 | ||
| macos-oldrel-arm64 | OK | 119 | ||
| macos-oldrel-x86_64 | OK | 210 | ||
| windows-devel | OK | 71 | ||
| windows-release | OK | 81 | ||
| windows-oldrel | OK | 69 | ||
| wasm-release | OK | 89 |
Exports:.onload.onUnloadallelefreqscheckpdcor2dprimecortocovcovtocordivlocushaplodatahaplofreqshaplosimldplotmakepdmergematsmsesumsqscale
Dependencies:MASS
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| ACE data set | ACEdata |
| Estimates allele frequencies | allelefreqs |
| Diversity score | divlocus |
| Haplotype object creator | haplodata |
| Haplotype frequencies | haplofreqs |
| Haplotype data simulator | haplosim |
| LD plot | ldplot |
| Merges two LD matrices | mergemats |