Package: proxysnps 0.0.1

Kamil Slowikowski

proxysnps: Get proxy SNPs for a SNP in the 1000 Genomes Project

This package implements functions to query remote VCF files. You can use it to find proxy SNPs in linkage disequilibrium with SNPs of interest or to calculate allele frequencies in different populations.

Authors:Kamil Slowikowski [aut, cre]

proxysnps_0.0.1.tar.gz
proxysnps_0.0.1.zip(r-4.7-any)proxysnps_0.0.1.zip(r-4.6-any)proxysnps_0.0.1.zip(r-4.5-any)
proxysnps_0.0.1.tgz(r-4.6-any)proxysnps_0.0.1.tgz(r-4.5-any)
proxysnps_0.0.1.tar.gz(r-4.7-any)proxysnps_0.0.1.tar.gz(r-4.6-any)
proxysnps_0.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
proxysnps/json (API)

# Install 'proxysnps' in R:
install.packages('proxysnps', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/slowkow/proxysnps/issues

On CRAN:

Conda:

bioinformaticslinkage-disequilibriumsnpsstatistics

3.19 score 31 stars 10 scripts 3 exports 2 dependencies

Last updated from:9a9a3158d5. Checks:7 ERROR, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develERROR151
source / vignettesOK373
linux-releaseERROR187
macos-releaseERROR111
macos-oldrelERROR153
windows-develERROR99
windows-releaseERROR100
windows-oldrelERROR110
wasm-releaseOK120

Exports:compute_ldget_proxiesget_vcf

Dependencies:bitopsRCurl