Package: proxysnps 0.0.1

Kamil Slowikowski

proxysnps: Get proxy SNPs for a SNP in the 1000 Genomes Project

This package implements functions to query remote VCF files. You can use it to find proxy SNPs in linkage disequilibrium with SNPs of interest or to calculate allele frequencies in different populations.

Authors:Kamil Slowikowski [aut, cre]

proxysnps_0.0.1.tar.gz
proxysnps_0.0.1.zip(r-4.7-any)proxysnps_0.0.1.zip(r-4.6-any)proxysnps_0.0.1.zip(r-4.5-any)
proxysnps_0.0.1.tgz(r-4.6-any)proxysnps_0.0.1.tgz(r-4.5-any)
proxysnps_0.0.1.tar.gz(r-4.7-any)proxysnps_0.0.1.tar.gz(r-4.6-any)
proxysnps_0.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
proxysnps/json (API)

# Install 'proxysnps' in R:
install.packages('proxysnps', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/slowkow/proxysnps/issues

On CRAN:

Conda:

bioinformaticslinkage-disequilibriumsnpsstatistics

3.19 score 31 stars 10 scripts 3 exports 2 dependencies

Last updated from:9a9a3158d5. Checks:7 ERROR, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develERROR178
source / vignettesOK231
linux-releaseERROR163
macos-releaseERROR113
macos-oldrelERROR117
windows-develERROR95
windows-releaseERROR102
windows-oldrelERROR92
wasm-releaseOK148

Exports:compute_ldget_proxiesget_vcf

Dependencies:bitopsRCurl