Package: tryx 0.2.1
tryx: MR-TRYX (treasure your exceptions)
Heterogeneity in MR analyses can arise due to horizontal pleiotropy. This package uses MR-Base to identify possible traits that can explain the heterogeneity, with a view to identifying novel putative associations, and adjusting for their influences to reduce heterogeneity and improve power.
Authors:
tryx_0.2.1.tar.gz
tryx_0.2.1.zip(r-4.7-any)tryx_0.2.1.zip(r-4.6-any)tryx_0.2.1.zip(r-4.5-any)
tryx_0.2.1.tgz(r-4.6-any)tryx_0.2.1.tgz(r-4.5-any)
tryx_0.2.1.tar.gz(r-4.7-any)tryx_0.2.1.tar.gz(r-4.6-any)
tryx_0.2.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
tryx/json (API)
| # Install 'tryx' in R: |
| install.packages('tryx', repos = c('https://mrcieu.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/explodecomputer/tryx/issues
Pkgdown/docs site:https://explodecomputer.github.io
Last updated from:d927e26f39 (on refs/pull/26/head). Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 186 | ||
| source / vignettes | OK | 426 | ||
| linux-release | OK | 192 | ||
| macos-release | OK | 119 | ||
| macos-oldrel | OK | 115 | ||
| windows-devel | OK | 97 | ||
| windows-release | OK | 94 | ||
| windows-oldrel | OK | 91 | ||
| wasm-release | OK | 121 |
Exports:cochrans_qTryxtryx.adjustmenttryx.analysetryx.analyse.mvtryx.networktryx.scantryx.sigtryx.simulatevolcano_plot
Dependencies:askpassbase64encbslibcachemclicodetoolscowplotcpp11crosstalkcurldata.tabledigestdplyrevaluatefarverfastmapfontawesomeforeachfsgenericsggplot2ggrepelglmnetglueGPArotationgridExtragtablehighrhtmltoolshtmlwidgetshttrieugwasrisobanditeratorsjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemimemnormtMRMixMRPRESSOnlmeopensslotelpbapplypillarpkgconfigplotlypromisespsychpurrrR6RadialMRrappdirsRColorBrewerRcppRcppEigenrlangrmarkdownS7sassscalesshapestringistringrsurvivalsystibbletidyrtidyselecttinytexTwoSampleMRutf8vctrsviridisLitewithrxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Cochran's Q statistic | cochrans_q |
| MR Strategy 1 | strategy1 |
| Class for MR-TRYX analysis | Tryx |
| Outlier adjustment estimation | tryx.adjustment |
| Analyse tryx results | tryx.analyse |
| Adjust and analyse the tryx results | tryx.analyse.mv |
| Plot results from outlier_scan in a network | tryx.network |
| Outlier scan | tryx.scan |
| Identify putatively significant associations in the outlier scan | tryx.sig |
| Simulate data to test tryx | tryx.simulate |
| Plot volcano plot of many MR analyses | volcano_plot |
